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authorYuri Victorovich <yuri@FreeBSD.org>2021-04-27 08:55:41 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2021-04-27 08:56:19 +0000
commitce04d9a5ee35cb5f34a91762172aaebd31a8c10f (patch)
tree755bb99d54c4a9eb1de7b63b52616e5d477cfca9 /biology
parent73074c728a155c3e78e4a612ace088319a39b137 (diff)
downloadports-ce04d9a5ee35cb5f34a91762172aaebd31a8c10f.tar.gz
ports-ce04d9a5ee35cb5f34a91762172aaebd31a8c10f.zip
biology/py-orange3-bioinformatics: Update 3.2.2 -> 4.3.1
Reported by: portscout
Diffstat (limited to 'biology')
-rw-r--r--biology/py-orange3-bioinformatics/Makefile13
-rw-r--r--biology/py-orange3-bioinformatics/distinfo6
2 files changed, 12 insertions, 7 deletions
diff --git a/biology/py-orange3-bioinformatics/Makefile b/biology/py-orange3-bioinformatics/Makefile
index 5ca207f97b00..f0bcfa101b50 100644
--- a/biology/py-orange3-bioinformatics/Makefile
+++ b/biology/py-orange3-bioinformatics/Makefile
@@ -1,8 +1,9 @@
PORTNAME= orange3-bioinformatics
-DISTVERSION= 3.2.2
-PORTREVISION= 3
+DISTVERSION= 4.3.1
CATEGORIES= biology python
+MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+DISTNAME= Orange3-Bioinformatics-${DISTVERSION}
MAINTAINER= yuri@FreeBSD.org
COMMENT= Orange add-on providing common functionality for bioinformatics
@@ -13,16 +14,20 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
DEPRECATED= Uses EOL Python 2.7 via misc/orange3
EXPIRATION_DATE=2021-06-23
+BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR}
RUN_DEPENDS= orange3>0:misc/orange3 \
${PYTHON_PKGNAMEPREFIX}Genesis-PyAPI>0:biology/py-Genesis-PyAPI@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}point-annotator>=2.0:math/py-point-annotator@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}pyclipper>=1.2.0:math/py-pyclipper@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests>0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}requests-cache>0:www/py-requests-cache@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}resdk>0:biology/py-resdk@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}scipy>=1.5.0:science/py-scipy@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}serverfiles>0:misc/py-serverfiles@${PY_FLAVOR}
USES= python:3.4+
-USE_GITHUB= yes
-GH_ACCOUNT= biolab
USE_PYTHON= distutils autoplist
+
NO_ARCH= yes
.include <bsd.port.mk>
diff --git a/biology/py-orange3-bioinformatics/distinfo b/biology/py-orange3-bioinformatics/distinfo
index 66ecb66011d0..71ee4b689827 100644
--- a/biology/py-orange3-bioinformatics/distinfo
+++ b/biology/py-orange3-bioinformatics/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1539463729
-SHA256 (biolab-orange3-bioinformatics-3.2.2_GH0.tar.gz) = 4654d77e3a4298b49f12289f1ade24cb8c8831753488c516764edef2ce472455
-SIZE (biolab-orange3-bioinformatics-3.2.2_GH0.tar.gz) = 1869440
+TIMESTAMP = 1619513096
+SHA256 (Orange3-Bioinformatics-4.3.1.tar.gz) = 4017518f9eeef0e8a9016a3e1c19b362f9f4d7f3e9dd07da0d8615a96a3b8447
+SIZE (Orange3-Bioinformatics-4.3.1.tar.gz) = 2943722