| Commit message (Expand) | Author | Age | Files | Lines |
|---|
| * | biology/bcf-score: Bcftools plugins for GWAS-VCF summary statistics | Jason W. Bacon | 2023-02-25 | 1 | -0/+1 |
| * | biology/wfa2-lib: Exact gap-affine algorithm using homology | Jason W. Bacon | 2023-01-30 | 1 | -0/+1 |
| * | biology/atac-seq: Metaport for ATAC-Seq analysis | Jason W. Bacon | 2023-01-11 | 1 | -0/+1 |
| * | biology/py-biosig: New port: Library for reading and writing different biosig... | Yuri Victorovich | 2022-12-30 | 1 | -0/+1 |
| * | biology/rna-seq: Metaport for RNA-Seq analysis | Jason W. Bacon | 2022-12-12 | 1 | -0/+1 |
| * | biology/fasda: Fast and simple differential analysis | Jason W. Bacon | 2022-12-12 | 1 | -0/+1 |
| * | biology/py-pyrodigal: New port: Python binding for Prodigal, an ORF finder fo... | Yuri Victorovich | 2022-12-06 | 1 | -0/+1 |
| * | biology/metaeuk: New port: Gene discovery and annotation for large-scale euka... | Yuri Victorovich | 2022-11-26 | 1 | -0/+1 |
| * | biology/augustus: New port: Genome annotation tool | Yuri Victorovich | 2022-11-25 | 1 | -0/+1 |
| * | biology/barrnap: New port: BAsic Rapid Ribosomal RNA Predictor | Yuri Victorovich | 2022-11-25 | 1 | -0/+1 |
| * | biology/megahit: Ultra-fast single-node metagenomics assembly | Jason W. Bacon | 2022-11-22 | 1 | -0/+1 |
| * | biology/libcombine: New port: C++ library for working with the COMBINE archiv... | Yuri Victorovich | 2022-10-21 | 1 | -0/+1 |
| * | biology/py-valerius: New port: Python bioinformatics tools | Yuri Victorovich | 2022-10-04 | 1 | -0/+1 |
| * | biology/kmcp: New port: Accurate metagenomic profiling & fast large-scale ge... | Yuri Victorovich | 2022-08-07 | 1 | -0/+1 |
| * | biology/ngs-sdk: Revert: Un-remove, ngs was moved into sra-tools | Yuri Victorovich | 2022-07-07 | 1 | -0/+1 |
| * | biology/ngs-sdk: Remove, ngs was moved into sra-tools | Yuri Victorovich | 2022-07-06 | 1 | -1/+0 |
| * | biology/mopac: Move to science/mopac; Add TIMESTAMP to distinfo; Take maintai... | Yuri Victorovich | 2022-06-19 | 1 | -1/+0 |
| * | biology/py-mrcfile: New port: MRC file I/O library which is used in structura... | Yuri Victorovich | 2022-05-01 | 1 | -0/+1 |
| * | biology/fastq-trim: Lightening fast sequence read trimmer | Jason W. Bacon | 2022-03-19 | 1 | -0/+1 |
| * | biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) | Jason W. Bacon | 2022-02-03 | 1 | -0/+2 |
| * | biology/libgff: GFF/GTF parsing library based on GCLib | Jason W. Bacon | 2021-12-05 | 1 | -0/+1 |
| * | biology/bio-mocha: bcftools plugin for mosaic chromosomal alterations | Jason W. Bacon | 2021-12-03 | 1 | -0/+1 |
| * | biology/gffread: GFF/GTF format conversions, filtering, FASTA extraction, etc | Jason W. Bacon | 2021-11-10 | 1 | -0/+1 |
| * | */Makefile: Sort SUBDIRs | Po-Chuan Hsieh | 2021-10-25 | 1 | -1/+1 |
| * | biology/py-deeptools: User-friendly tools for exploring deep-sequencing data | Jason W. Bacon | 2021-10-14 | 1 | -0/+1 |
| * | biology/py-bigwig: Rename to biology/py-pybigwig | Jason W. Bacon | 2021-10-13 | 1 | -1/+1 |
| * | biology/py-pybigwig: remove, duplicate of biology/py-bigwig | Antoine Brodin | 2021-10-13 | 1 | -1/+0 |
| * | biology/py-pybigwig: Fix poudriere build | Jason W. Bacon | 2021-10-13 | 1 | -0/+1 |
| * | biology/py-pybigwig: Python access to bigWig files using libBigWig | Jason W. Bacon | 2021-10-13 | 1 | -0/+1 |
| * | biology/py-py2bit: Python interface for 2bit packed nucleotide files | Jason W. Bacon | 2021-10-13 | 1 | -0/+1 |
| * | biology/bamutil: Utilities for working with SAM/BAM files | Jason W. Bacon | 2021-10-12 | 1 | -0/+1 |
| * | biology/libneurosim: New port: Common interfaces for neuronal simulators | Yuri Victorovich | 2021-10-08 | 1 | -0/+1 |
| * | */Makefile: Sort SUBDIRs | Po-Chuan Hsieh | 2021-09-21 | 1 | -2/+2 |
| * | biology/py-libsedml: New port: SED-ML library for Python | Yuri Victorovich | 2021-09-19 | 1 | -0/+1 |
| * | biology/libsedml: New port: C++ SED-ML library | Yuri Victorovich | 2021-09-19 | 1 | -0/+1 |
| * | biology/py-libnuml: New port: Numerical Markup Language for Python | Yuri Victorovich | 2021-09-19 | 1 | -0/+1 |
| * | biology/libnuml: New port: C++ library for Numerical Markup Language | Yuri Victorovich | 2021-09-19 | 1 | -0/+1 |
| * | biology/sam2pairwise: Show pairwise alignment for each read in a SAM file | Jason W. Bacon | 2021-09-07 | 1 | -0/+1 |
| * | biology/py-pywgsim: Modified wgsim genomic data simulator | Jason W. Bacon | 2021-09-06 | 1 | -0/+1 |
| * | biology/biolibc-tools: High-performance tools based on biolibc | Jason W. Bacon | 2021-08-30 | 1 | -0/+1 |
| * | biology/bfc: Correct sequencing errors from Illumina sequencing data | Jason W. Bacon | 2021-08-23 | 1 | -0/+1 |
| * | biology/flash: Fast Length Adjustment of SHort reads | Jason W. Bacon | 2021-08-23 | 1 | -0/+1 |
| * | biology/py-PySCeS: New port: Python Simulator for Cellular Systems | Yuri Victorovich | 2021-08-17 | 1 | -0/+1 |
| * | biology/py-python-libsbml: New port: LibSBML Python API | Yuri Victorovich | 2021-08-17 | 1 | -0/+1 |
| * | biology/sigviewer: New port: Viewing application for biosignals | Yuri Victorovich | 2021-08-17 | 1 | -0/+1 |
| * | biology/biosig: New port: Library for reading and writing different biosignal... | Yuri Victorovich | 2021-08-17 | 1 | -0/+1 |
| * | biology/py-ont-fast5-api: Interface to Oxford Nanopore .fast5 files | Jason W. Bacon | 2021-08-13 | 1 | -0/+1 |
| * | biology/erminej: Analyses of gene sets, e.g. gene expression profiling | Jason W. Bacon | 2021-07-09 | 1 | -0/+1 |
| * | biology/py-goatools: Tools for processing and visualizing Gene Ontology terms | Jason W. Bacon | 2021-07-02 | 1 | -0/+1 |
| * | biology/mmseqs2: Ultra fast and sensitive sequence search and clustering suite | Jason W. Bacon | 2021-06-24 | 1 | -0/+1 |
