aboutsummaryrefslogtreecommitdiff
path: root/biology
Commit message (Expand)AuthorAgeFilesLines
* Fix MASTER_SITESAntoine Brodin2014-09-051-1/+1
* Second run at cleaning out non staged ports without pending PRBaptiste Daroussin2014-09-025-69/+0
* Remove non staged ports without pending PR from b*Baptiste Daroussin2014-09-0115-1973/+0
* - Update Unipro UGENE and documentation to version 1.14.0Alexey Dokuchaev2014-09-017-226/+71
* biology/crux: stage, modernize, add license (BSD[23]CLAUSE), cleanupsRene Ladan2014-08-264-46/+63
* - StagifyDmitry Marakasov2014-08-258-3/+124
* update ports:Kurt Jaeger2014-08-2331-1187/+735
* Fix build. Hopefully it doesn't break the app.Adam Weinberger2014-08-221-0/+11
* Fix build on -current by un-clobbering LDFLAGS. Also, don'tAdam Weinberger2014-08-152-4/+13
* - Update to 5.10.2Wen Heping2014-08-104-270/+232
* Convert the Python framework bits to USES=python.Marcus von Appen2014-08-091-2/+2
* - Switch to USES=libtool, drop .la filesDmitry Marakasov2014-08-062-4/+4
* USES=execinfoBaptiste Daroussin2014-08-042-6/+2
* biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagifyKurt Jaeger2014-08-045-217/+296
* biology/p5-bioperl: fix pkg-descr sidenote linkKurt Jaeger2014-08-041-1/+1
* Add a DOCS option.Adam Weinberger2014-08-032-5/+7
* biology/seqtools: 4.27 -> 4.28Kurt Jaeger2014-07-312-3/+3
* Convert a bunch of EXTRACT_SUFX=... into USES=tar:...Adam Weinberger2014-07-298-16/+8
* Convert a bunch of USE_BZIP2 to USES=tar:bzip2Adam Weinberger2014-07-292-4/+2
* Rename biology/ patch-xy patches to reflect the files they modify.Adam Weinberger2014-07-2811-13/+13
* - Update to 1.6.924 [1]Wen Heping2014-07-273-10/+11
* Really fix.Mathieu Arnold2014-07-251-2/+0
* Fix build.Mathieu Arnold2014-07-251-1/+1
* biology/p5-Bio-Graphics: 2.37 -> 2.38Kurt Jaeger2014-07-242-3/+3
* Reset maintainership for ports not staged with no pending PRBaptiste Daroussin2014-07-236-6/+6
* - Switch to USES=libtool, drop .la filesDmitry Marakasov2014-07-222-3/+4
* biology/mummer: Use OPSYS with OSVERSIONJohn Marino2014-07-191-1/+1
* biology/garlic: Stage properly to unbreakJohn Marino2014-07-171-7/+5
* Add OPTIONS_DEFINE=DOCS for ports with %%PORTDOCS%% in the plist.Adam Weinberger2014-07-151-0/+2
* Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.Adam Weinberger2014-07-152-14/+21
* biology/platon: Unbreak by hosting known distfiles elsewhereJohn Marino2014-07-132-6/+9
* biology/seqtools: 4.26 -> 4.27Kurt Jaeger2014-07-122-4/+3
* Use gcc on all platforms.Adam Weinberger2014-07-101-6/+1
* Stagify.Vanilla I. Shu2014-07-061-6/+5
* Missed a NOPORTDOCS.Adam Weinberger2014-07-051-3/+4
* Remove NOPORTDOCS and NOPORTEXAMPLES from unstaged ports. Stage a couple whileAdam Weinberger2014-07-041-21/+19
* - Chase database/sqlite3 slib bumpMartin Wilke2014-06-271-0/+1
* Fix compilation on 10+ (clang)Martin Wilke2014-06-272-2/+10
* - Mark BROKENWen Heping2014-06-261-0/+2
* Put HOME in MAKE_ARGS to handle pverride of HOME in MAKE_ENV from bsd.port.mkAntoine Brodin2014-06-251-1/+2
* Use MAKE_CMD instead of GMAKEBaptiste Daroussin2014-06-241-2/+2
* Mark as broken: no distinfo providedBaptiste Daroussin2014-06-221-2/+1
* Mark as broken: no distinfo providedBaptiste Daroussin2014-06-221-3/+1
* Fix shebang line in Perl and Python scripts.Raphael Kubo da Costa2014-06-201-13/+6
* Mark BROKEN: Fails to configureAntoine Brodin2014-06-191-0/+2
* biology/blast: Deprecate for removal after 4 September 2014John Marino2014-06-191-0/+3
* Update to 1.2.10.Raphael Kubo da Costa2014-06-173-35/+23
* Update to 3.8.31.Raphael Kubo da Costa2014-06-175-89/+37
* Reset the 99 ports still listed under sylvio@John Marino2014-06-111-1/+1
* Remove all the bootstrap files (.bs) from the plists.Mathieu Arnold2014-06-102-3/+0