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* - Remove unnecessary USES=shebangfixSunpoet Po-Chuan Hsieh2016-11-201-4/+8
* Bump PORTREVISIONS for ports depending on the canonical version of GCC andGerald Pfeifer2016-11-205-2/+5
* biology/avida: Fix ncurses from ports supportJohn Marino2016-11-191-1/+3
* biology/njplot: Revive and update to version 2.4Joseph Mingrone2016-11-165-0/+109
* Mark various leaf ports broken on aarch64, and, where appropriate, otherMark Linimon2016-11-114-2/+8
* Attempt to fix build on non-x86 archs.Mark Linimon2016-11-111-3/+5
* biology/seqtools: update 4.43.0 -> 4.44.1Kurt Jaeger2016-11-113-4/+14
* biology/molden: add missing LICENSE_NAMEKurt Jaeger2016-11-101-1/+2
* biology/molden: fix distinfo, set LICENSEKurt Jaeger2016-11-092-7/+11
* The 64-bit arm arch is actually spelled 'aarch64', not 'arm64'.Mark Linimon2016-11-083-3/+3
* Mark as broken on arm64.Mark Linimon2016-11-081-0/+2
* Mark broken on all tier-2 archs.Mark Linimon2016-11-081-0/+3
* Mark broken on the rest of the tier-2 archs: invokes x86 asm.Mark Linimon2016-11-081-1/+4
* biology/diamond: Update to version 0.8.26Joseph Mingrone2016-11-062-4/+4
* Cleanup no longer needed CHMOD usage after r424898.Mathieu Arnold2016-11-024-12/+5
* - Mark it BROKENWen Heping2016-10-281-1/+3
* Use USES=pathfix where applicable.Mathieu Arnold2016-10-214-21/+11
* ${RM} already has -f.Mathieu Arnold2016-10-213-3/+3
* biology/diamond: update to version 0.8.24Joseph Mingrone2016-10-172-4/+4
* biology/diamond: update to version 0.8.23Joseph Mingrone2016-10-102-4/+4
* Mark BROKEN: unfetchable, size mismatchAntoine Brodin2016-10-011-0/+1
* biology/blat: Fix build with non-base SSLJohn Marino2016-09-301-4/+4
* Update PORTREVISION and dinstinfo due to upstream tarball changeJoseph Mingrone2016-09-292-3/+4
* biology/paml: update to version 4.9c and various improvementsJoseph Mingrone2016-09-284-33/+48
* Update email address to jrm@FreeBSD.org for ports that I maintainJoseph Mingrone2016-09-233-5/+3
* - Update to 1.68Wen Heping2016-09-232-3/+4
* - Update biology/seqan and bilogy/seqan-apps to version 2.2.0 [1]Pawel Pekala2016-09-146-28/+39
* GOOGLE_CODE has gone away.Mathieu Arnold2016-09-141-0/+2
* - Update to 0.8.22Dmitry Marakasov2016-09-132-4/+4
* biology/ncbi-blast+: Remove redundant LIB_DEPENDS (bz2 libary)John Marino2016-09-111-3/+2
* - Update to 1.72Wen Heping2016-09-112-4/+4
* Most commonly used build systems support silent builds, when theyDmitry Marakasov2016-09-091-1/+1
* - Make configure script handle --disable-silent-rules gracefullyDmitry Marakasov2016-09-061-1/+1
* - Update to 0.8.20Wen Heping2016-09-062-4/+4
* - Replace Mk/bsd.linux-apps.mk and Mk/bsd.linux-rpm.mk withTijl Coosemans2016-09-052-4/+3
* biology/molden: 5.4 -> 5.7Kurt Jaeger2016-08-262-6/+4
* Update to version 0.8.19Pawel Pekala2016-08-252-4/+4
* - Mark BROKEN: does not fetch (distfile was removed from ftp)Dmitry Marakasov2016-08-221-0/+2
* biology/bedtools is not jobs safeJohn Marino2016-08-221-0/+2
* - Switch to options helpersDmitry Marakasov2016-08-183-16/+11
* Update biology/diamond to 0.8.18.Brad Davis2016-08-142-4/+4
* - Update to 1.9 [1]Wen Heping2016-08-082-10/+8
* Update to version 0.8.17Pawel Pekala2016-08-052-5/+5
* biology/seqtools: 4.42.1 -> 4.43.0Kurt Jaeger2016-07-313-17/+227
* Update to upstream release 0.8.16Thomas Zander2016-07-242-4/+4
* Cleanup $() variables in ports Makefiles.Mathieu Arnold2016-07-201-1/+1
* - update libgd to 2.2.2Dirk Meyer2016-07-201-1/+1
* When there is a do-install target, do not use a post-install target, doMathieu Arnold2016-07-193-4/+5
* Trim excess tabs, no-op changePawel Pekala2016-07-141-13/+13
* Update to version 0.8.14Pawel Pekala2016-07-142-4/+4
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