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* biology/diamond: Update to 2.1.1Joseph Mingrone2023-02-102-4/+4
* all: Bump PORTREVISION after GO_DEFAULT update.Dmitri Goutnik2023-02-095-4/+5
* biology/vcflib: Update to 1.0.7Jason W. Bacon2023-02-093-8/+21
* Revert "Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install ...Charlie Li2023-02-051-1/+0
* Mk/Uses/python.mk: Fix USE_PYTHON=pep517: always compile and install bytecodePo-Chuan Hsieh2023-02-051-0/+1
* biology/hyphy: Update to 2.5.47Joseph Mingrone2023-02-042-4/+4
* biology/emboss: Ignore with mysql 8.0Muhammad Moinur Rahman2023-02-011-0/+1
* biology/vcflib: Unbreak build on aarch64, probably othersJason W. Bacon2023-01-312-8/+9
* biology/wfa2-lib: Unbreak build on aarch64, probably othersJason W. Bacon2023-01-312-0/+12
* biology/p5-transdecoder: Update to 5.7.0Jason W. Bacon2023-01-302-5/+4
* biology/vcflib: Update to 1.0.6Jason W. Bacon2023-01-304-45/+28
* biology/wfa2-lib: Exact gap-affine algorithm using homologyJason W. Bacon2023-01-306-0/+89
* biology/py-resdk: Update 15.0.0 → 16.0.0Yuri Victorovich2023-01-283-6/+23
* biology/kmcp: Update 0.8.4 → 0.9.1Yuri Victorovich2023-01-282-7/+6
* biology/vcflib: Patch in time.h for struct timespecJason W. Bacon2023-01-262-1/+11
* lang/zig: rebuild consumers after 91552559ae79Jan Beich2023-01-231-0/+1
* biology/prodigy-lig: Update 1.0.0-3 -> 1.0.1Yuri Victorovich2023-01-232-6/+6
* biology/vcflib: Update to 1.0.5Jason W. Bacon2023-01-224-25/+61
* biology/tabixpp: DeprecateJason W. Bacon2023-01-221-0/+2
* biology/freebayes: Drop redundant tabixpp depJason W. Bacon2023-01-221-3/+2
* biology/bowtie2: Update to 2.5.1Jason W. Bacon2023-01-213-27/+9
* math/suitesparse*: bump PORTREVISION of dependant portsThierry Thomas2023-01-192-0/+2
* graphics/proj: Update to 9.1.1Loïc Bartoletti2023-01-181-1/+1
* biology/libsbml: unbreak build after 18c6e1827669 (+)Dima Panov2023-01-181-1/+1
* */*: bump libboost*.so libraries consumert after Boost upgradeDima Panov2023-01-164-4/+4
* Mk/**ruby.mk: Switch from USE_RUBY=yes to USES=rubyMuhammad Moinur Rahman2023-01-145-7/+1
* all: Bump PORTVERSION after lang/go{118,119} updateDmitri Goutnik2023-01-145-3/+5
* biology/rna-seq: Update to 0.1.1Jason W. Bacon2023-01-122-4/+5
* biology/atac-seq: Update to 0.1.1Jason W. Bacon2023-01-122-4/+5
* biology/atac-seq: Metaport for ATAC-Seq analysisJason W. Bacon2023-01-114-0/+31
* */*: rename CHEESESHOP to PYPI in MASTER_SITESDmitry Marakasov2023-01-1134-34/+34
* biology/hyphy: Update to upstream tag 2.5.46hf1Joseph Mingrone2023-01-103-55/+6
* biology/vcflib: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/tabixpp: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/star: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/pbbam: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/jellyfish: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/freebayes: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-0/+1
* biology/vt: Bump PORTREVISION for biology/htslib updateJason W. Bacon2023-01-061-1/+1
* biology/bio-mocha: Update to 1.16Jason W. Bacon2023-01-053-13/+9
* biology/bcftools: Update to 1.16Jason W. Bacon2023-01-053-4/+5
* biology/samtools: Update to 1.16.1Jason W. Bacon2023-01-053-4/+5
* biology/htslib: Update to 1.16Jason W. Bacon2023-01-052-4/+4
* biology/lamarc: Refactor after wxgtk28 removalMuhammad Moinur Rahman2022-12-311-7/+7
* biology/py-biosig: New port: Library for reading and writing different biosig...Yuri Victorovich2022-12-304-0/+36
* biology/biosig: Update 2.4.3 -> 2.5.0Yuri Victorovich2022-12-303-5/+53
* biology/taxonkit: Update 0.14.0 -> 0.14.1Yuri Victorovich2022-12-272-7/+6
* biology/unikmer: Update 0.19.0 -> 0.19.1Yuri Victorovich2022-12-272-7/+6
* biology/hyphy: Update to 2.5.43Joseph Mingrone2022-12-262-4/+4
* biology/py-pyrodigal: Update 2.0.2 -> 2.0.3Yuri Victorovich2022-12-222-5/+5
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