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* science/erkale: Update g20200426 -> g20210215Yuri Victorovich2021-04-092-6/+5
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* devel/icu: update to 69.1Jan Beich2021-04-081-1/+1
| | | | | Changes: https://github.com/unicode-org/icu/releases/tag/release-69-1 Reported by: GitHub (watch releases)
* science/lammps: Update 10Mar2021 -> 8Apr2021Yuri Victorovich2021-04-082-4/+4
| | | | Reported by: GH release notification
* science/molsketch: Update 0.7.1 -> 0.7.2Yuri Victorovich2021-04-072-6/+6
| | | | Reported by: portscout
* astro/py-spktype01 et al.: fix the dependency on PYNUMPYThierry Thomas2021-04-072-2/+4
| | | | | | | | | | Some ports, like astro/py-spktype01, uses the undefined variable ${NUMPY} in their _DEPENDS fields and this must be replaced by the correct ${PYNUMPY}. PR: 254740 Reported by: Bojan Petrovic Approved by: QA blanket for the ports that I do not maintain
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-07169-169/+0
| | | | Reported by: lwhsu
* science/dlib-cpp and science/py-dlib: Update to 19.22Gleb Popov2021-04-075-14/+18
| | | | Remove USE_GCC=yes as it seems to be implied by using blaslapack:openblas
* science/afni: update to 21.1.00Fernando Apesteguía2021-04-072-4/+4
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* science/libecpint: Add explicit Python build dependency (D29353)Tobias Kortkamp2021-04-071-1/+1
| | | | | | | | | | | | | | | | | | | | This unbreaks the build when using devel/samurai. It previously got it through ninja which has a run dependency on Python. -- Could NOT find Python (missing: Python_EXECUTABLE Interpreter) CMake Error at src/CMakeLists.txt:22 (file): file failed to open for reading (No such file or directory): /wrkdirs/usr/ports/science/libecpint/work/.build/src/qlist.txt CMake Error at src/CMakeLists.txt:24 (add_custom_command): add_custom_command Wrong syntax. A TARGET or OUTPUT must be specified. http://package18.nyi.freebsd.org/data/122amd64-default-foo/2021-04-04_07h37m38s/logs/errors/libecpint-1.0.5.log PR: 254678
* science/yoda: Update 1.8.5 -> 1.9.0Yuri Victorovich2021-04-063-4/+7
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* science/kst2: fix build ahead of CMake 3.20Adriaan de Groot2021-04-062-4/+17
| | | | | | Multiple else() blocks with one if() were treated as if they were elseif() blocks except for the last one; this is now a syntax error.
* all: Remove all other $FreeBSD keywords.Mathieu Arnold2021-04-063-5/+0
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* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-06356-358/+0
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* science/simgrid: add libunwind to LIB_DEPENDS on powerpc64lePiotr Kubaj2021-04-061-0/+1
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* science/afni: update to 21.0.21Fernando Apesteguía2021-03-282-4/+4
| | | | Notes: svn path=/head/; revision=569378
* science/shelxle: Update 1.0.1233 -> 1.0.1235Yuri Victorovich2021-03-252-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=569195
* science/smoldyn: Update 2.63 -> 2.64Yuri Victorovich2021-03-252-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=569194
* science/abinit: Update 9.4.0 -> 9.4.1Yuri Victorovich2021-03-242-5/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=569091
* Fix spelling mistakes, typos, poor wording, hyphenation, jargonisms,Alexey Dokuchaev2021-03-225-5/+5
| | | | | | | | contractions, "<portname> is ..." cases, missing Oxford commas, and other miscellaneous style bugs in the COMMENT line. Notes: svn path=/head/; revision=568947
* science/py-phono3py: Update 1.13.3.27 -> 1.22.3Yuri Victorovich2021-03-202-14/+12
| | | | Notes: svn path=/head/; revision=568851
* science/py-phonopy: 2.9.1 -> 2.9.3Yuri Victorovich2021-03-202-4/+4
| | | | Notes: svn path=/head/; revision=568840
* science/py-pymatgen: Update 2022.0.4 -> 2022.0.5Yuri Victorovich2021-03-202-12/+12
| | | | Notes: svn path=/head/; revision=568839
* - Update to 1.7-6TAKATSU Tomonari2021-03-202-4/+4
| | | | Notes: svn path=/head/; revision=568837
* science/afni: update to 21.0.20Fernando Apesteguía2021-03-182-5/+5
| | | | | | | | | While here, adopt port. Reported by: portscout Notes: svn path=/head/; revision=568750
* science/agrum: Update 0.19.2 -> 0.19.3Yuri Victorovich2021-03-183-6/+5
| | | | Notes: svn path=/head/; revision=568734
* science/jmol: Update 14.31.34 -> 14.31.35Yuri Victorovich2021-03-182-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568725
* science/afni: update to 21.0.19Fernando Apesteguía2021-03-172-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568676
* science/afni: Update to 21.0.18Neel Chauhan2021-03-162-4/+4
| | | | Notes: svn path=/head/; revision=568604
* science/shelxle: Update 1.0.1231 -> 1.0.1233Yuri Victorovich2021-03-162-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568587
* - Update to 1.7-5TAKATSU Tomonari2021-03-162-4/+8
| | | | Notes: svn path=/head/; revision=568559
* PyQt5: Update PyQt5 to 5.15.4 and py-qtbuilder to 1.9.1Loïc Bartoletti2021-03-162-2/+2
| | | | | | | | PR: 254218 Exp-run by: antoine Notes: svn path=/head/; revision=568547
* science/elk: Update 6.8.4 -> 7.1.14Yuri Victorovich2021-03-152-5/+5
| | | | | | | Reported by: upstream notification Notes: svn path=/head/; revision=568483
* science/afni: update to 21.0.17Fernando Apesteguía2021-03-152-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568439
* science/py-dipy: Update 1.3.0 -> 1.4.0Yuri Victorovich2021-03-152-4/+4
| | | | Notes: svn path=/head/; revision=568435
* science/py-abipy: Update 0.8.0 -> 0.9.0Yuri Victorovich2021-03-152-6/+5
| | | | Notes: svn path=/head/; revision=568434
* science/shelxle: Update 1.0.1229 -> 1.0.1231Yuri Victorovich2021-03-142-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568365
* science/votca: Update 1.6.3 -> 2021Yuri Victorovich2021-03-143-121/+119
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568364
* science/molsketch: Update 0.7.0 -> 0.7.1Yuri Victorovich2021-03-124-21/+12
| | | | Notes: svn path=/head/; revision=568212
* Upgrade to v2021.3.0.Thierry Thomas2021-03-122-4/+4
| | | | | | | | Release notes at <https://github.com/fekad/jupyter-jsmol/releases/tag/v2021.3.0>. Notes: svn path=/head/; revision=568190
* - Update math/glm to 0.9.9.8Dmitry Marakasov2021-03-121-1/+1
| | | | Notes: svn path=/head/; revision=568184
* science/py-gsd: Update 2.4.0 -> 2.4.1Yuri Victorovich2021-03-122-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568160
* science/afni: update to 21.0.16Fernando Apesteguía2021-03-123-4/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568145
* science/py-moltemplate: Update 2.19.6 -> 2.19.7Yuri Victorovich2021-03-112-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568109
* science/afni: update to 21.0.15Fernando Apesteguía2021-03-112-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=568069
* science/lammps: Update 10Feb2021 -> 10Mar2021Yuri Victorovich2021-03-113-9/+13
| | | | | | | Reported by: GH release notification Notes: svn path=/head/; revision=568061
* science/py-pymatgen: Update 2022.0.3 -> 2022.0.4Yuri Victorovich2021-03-102-4/+4
| | | | Notes: svn path=/head/; revision=567983
* science/thermofun: Update 0.3.6 -> 0.3.7Yuri Victorovich2021-03-092-5/+5
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=567960
* science/afni: update to 21.0.14Fernando Apesteguía2021-03-092-4/+4
| | | | | | | Reported by: portscout Notes: svn path=/head/; revision=567907
* science/gromacs: Update 2021 -> 2021.1Yuri Victorovich2021-03-092-4/+4
| | | | Notes: svn path=/head/; revision=567890
* science/rdkit: Add PGSQL option to build the PostgreSQL cartridgeYuri Victorovich2021-03-082-6/+22
| | | | | | | Also fix build with DOCS=OFF Notes: svn path=/head/; revision=567856
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