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* biology/py-pysam: update 0.21.0 → 0.22.0Yuri Victorovich2023-10-062-4/+4
* biology/rubygem-bio: Update to 2.0.5Po-Chuan Hsieh2023-09-302-4/+4
* biology/libsbml: Update to 5.20.2Po-Chuan Hsieh2023-09-302-4/+4
* biology/wfa2-lib: Update to 2.3.4Jason W. Bacon2023-09-295-7/+24
* biology/mothur: Remove CC/CPP/CXX exportsMuhammad Moinur Rahman2023-09-281-3/+0
* devel/boost*: bump all consumers after 1.83.0Dima Panov2023-09-274-4/+4
* /*: bump PORTREVISION after the upgrade of SuiteSparseThierry Thomas2023-09-202-1/+2
* biology/kmcp: update 0.9.3 → 0.9.4Yuri Victorovich2023-09-182-7/+6
* biology/seqan3: update 3.2.0 → 3.3.0Yuri Victorovich2023-09-103-23/+35
* biology/pooler: Update to 1.88Jason W. Bacon2023-09-102-4/+4
* all: Bump PORTREVISION after lang/go* updateDmitri Goutnik2023-09-085-3/+5
* biology/peak-classifier: Clean up USES=pythonPo-Chuan Hsieh2023-09-061-1/+1
* biology/hyphy: Update to 2.5.53Joseph Mingrone2023-09-052-4/+4
* biology/iqtree: Update to 2.2.2.7Joseph Mingrone2023-09-053-14/+16
* biology/spoa: update 4.0.7 → 4.1.0Yuri Victorovich2023-08-294-128/+21
* biology/bioparser: update 3.0.15 → 3.1.0Yuri Victorovich2023-08-292-4/+6
* biology/biosoup: Install cmake filesYuri Victorovich2023-08-292-6/+7
* biology/py-resdk: update 19.0.0 → 19.0.1Yuri Victorovich2023-08-282-4/+4
* biology/ncbi-blast+: Update to 2.14.1Jason W. Bacon2023-08-263-6/+19
* biology/seqwish: Add commentYuri Victorovich2023-08-251-0/+2
* biology/py-resdk: update 18.0.0 → 19.0.0Yuri Victorovich2023-08-252-4/+4
* biology/taxonkit: Update 0.14.2 → 0.15.0Yuri Victorovich2023-08-222-7/+6
* biology/mashmap: Update 3.1.0 → 3.1.1Yuri Victorovich2023-08-222-4/+4
* biology/mashmap: Update 3.0.6 → 3.1.0Yuri Victorovich2023-08-222-6/+6
* biology/star: Fix SIMD issue on non-amd64Jason W. Bacon2023-08-212-12/+9
* devel/onetbb: Update to 2021.10.0Ganael LAPLANCHE2023-08-211-0/+1
* biology/star: fix build on !amd64Piotr Kubaj2023-08-191-0/+6
* biology/viennarna: Mark BROKEN on 14Muhammad Moinur Rahman2023-08-181-0/+2
* biology/lamarc: Mark BROKEN on 14Muhammad Moinur Rahman2023-08-181-0/+2
* biology/mothur: Fix build on 14Muhammad Moinur Rahman2023-08-181-1/+10
* biology/star: Update to 2.7.11aJason W. Bacon2023-08-174-27/+7
* biology/seqwish: Broken on i386Yuri Victorovich2023-08-171-0/+2
* biology/mothur: Fix build with clang-16Yuri Victorovich2023-08-151-0/+1
* biology/bifrost: Control -march via CPUTYPE make variableJason W. Bacon2023-08-122-10/+12
* biology/cd-hit: allow to build without GCC on libomp-less systemsPiotr Kubaj2023-08-121-4/+4
* biology/peak-classifier: Update to 0.1.4.11Jason W. Bacon2023-08-112-6/+6
* biology/biolibc-tools: Update to 0.1.4.9Jason W. Bacon2023-08-113-7/+7
* biology/fasda: Update to 0.1.4Jason W. Bacon2023-08-112-4/+5
* biology/biolibc: Update to 0.2.5Jason W. Bacon2023-08-113-68/+67
* biology/sra-tools: Update to 3.0.6Jason W. Bacon2023-08-1069-2226/+898
* biology/hyphy: Update to 2.5.52Joseph Mingrone2023-08-094-19/+6
* biology/seqkit: Update 2.5.0 → 2.5.1Yuri Victorovich2023-08-092-9/+8
* biology/seqan-apps: Fix build with llvm16Muhammad Moinur Rahman2023-08-061-0/+1
* biology/augustus: Fix build with llvm16Muhammad Moinur Rahman2023-08-061-0/+1
* biology/py-macs2: Update to 2.2.9.1Jason W. Bacon2023-08-063-32/+14
* p5-transdecoder: Update to 5.7.1Jason W. Bacon2023-08-052-4/+4
* biology/p5-TrimGalore: Fix buildMuhammad Moinur Rahman2023-08-051-1/+1
* biology/primer3: Fix build with llvm16Muhammad Moinur Rahman2023-08-051-1/+1
* biology/py-htseq: Update to 2.0.4Jason W. Bacon2023-08-052-4/+4
* biology/py-multiqc: Update to 1.15Jason W. Bacon2023-08-052-4/+4
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